pLV3-U6-MCS-shRNA-Blast 载体 (V014878#)

载体名称:
pLV3-U6-MCS-shRNA-Blast
载体抗性:
Ampicillin
载体长度:
6805 bp
载体类型:
RNA interference
复制子:
ori
宿主:
Mammalian cells, Lentivirus
筛选标记:
Blast
启动子:
hPGK
5'引物:
U6-F:GAGGGCCTATTTCCCATGA

pLV3-U6-MCS-shRNA-Blast 载体载体图谱

pLV3-U6-MCS-shRNA-Blast6805 bp3006009001200150018002100240027003000330036003900420045004800510054005700600063006600hPGK promoterBSD3' LTR (Delta-U3)SV40 poly(A) signalSV40 oriT7 promoterM13 fwdf1 oriAmpR promoterAmpRoriCAP binding sitelac promoterlac operatorM13 revT3 promoterRSV promoter5' LTR (truncated)HIV-1 PsiRREgp41 peptideProtein Tat from Human immunodeficiency virus type 1 group M subtype B (isolate WMJ22). Accession#: P12509U6 promotercPPT/CTShPGK promoter

pLV3-U6-MCS-shRNA-Blast 载体载体序列

LOCUS       62056_15680        6805 bp DNA     circular SYN 01-JAN-1980
DEFINITION  synthetic circular DNA.
ACCESSION   .
VERSION     .
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
REFERENCE   1  (bases 1 to 6805)
  AUTHORS   .
  TITLE     Direct Submission
FEATURES             Location/Qualifiers
     source          1..6805
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     promoter        7..507
                     /label=hPGK promoter
                     /note="human phosphoglycerate kinase 1 promoter"
     CDS             535..930
                     /label=BSD
                     /note="blasticidin S deaminase"
     LTR             1011..1244
                     /label=3' LTR (Delta-U3)
                     /note="self-inactivating 3' long terminal repeat (LTR) from
                     HIV-1"
     polyA_signal    1316..1450
                     /label=SV40 poly(A) signal
                     /note="SV40 polyadenylation signal"
     rep_origin      1477..1612
                     /label=SV40 ori
                     /note="SV40 origin of replication"
     promoter        complement(1633..1651)
                     /label=T7 promoter
                     /note="promoter for bacteriophage T7 RNA polymerase"
     primer_bind     complement(1661..1677)
                     /label=M13 fwd
                     /note="common sequencing primer, one of multiple similar 
                     variants"
     rep_origin      1819..2274
                     /label=f1 ori
                     /note="f1 bacteriophage origin of replication; arrow
                     indicates direction of (+) strand synthesis"
     promoter        2300..2404
                     /label=AmpR promoter
     CDS             2405..3262
                     /label=AmpR
                     /note="beta-lactamase"
     rep_origin      3436..4024
                     /label=ori
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of 
                     replication"
     protein_bind    4312..4333
                     /label=CAP binding site
                     /note="CAP binding activates transcription in the presence
                     of cAMP."
     promoter        4348..4378
                     /label=lac promoter
                     /note="promoter for the E. coli lac operon"
     protein_bind    4386..4402
                     /label=lac operator
                     /note="The lac repressor binds to the lac operator to
                     inhibit transcription in E. coli. This inhibition can be 
                     relieved by adding lactose or 
                     isopropyl-beta-D-thiogalactopyranoside (IPTG)."
     primer_bind     4410..4426
                     /label=M13 rev
                     /note="common sequencing primer, one of multiple similar 
                     variants"
     promoter        4447..4465
                     /label=T3 promoter
                     /note="promoter for bacteriophage T3 RNA polymerase"
     promoter        4493..4719
                     /label=RSV promoter
                     /note="Rous sarcoma virus enhancer/promoter"
     LTR             4720..4900
                     /label=5' LTR (truncated)
                     /note="truncated 5' long terminal repeat (LTR) from HIV-1"
     misc_feature    4947..5072
                     /label=HIV-1 Psi
                     /note="packaging signal of human immunodeficiency virus
                     type 1"
     misc_feature    5565..5798
                     /label=RRE
                     /note="The Rev response element (RRE) of HIV-1 allows for 
                     Rev-dependent mRNA export from the nucleus to the 
                     cytoplasm."
     CDS             5983..6027
                     /label=gp41 peptide
                     /note="antigenic peptide corresponding to amino acids 655
                     to 669 of the HIV envelope protein gp41 (Lutje Hulsik et 
                     al., 2013)"
     CDS             6176..6217
                     /note="Protein Tat from Human immunodeficiency virus type 1
                     group M subtype B (isolate WMJ22). Accession#: P12509"
     promoter        6325..6565
                     /label=U6 promoter
                     /note="RNA polymerase III promoter for human U6 snRNA"
     misc_feature    6636..6753
                     /label=cPPT/CTS
                     /note="central polypurine tract and central termination
                     sequence of HIV-1"
     promoter        6802..6805
                     /label=hPGK promoter
                     /note="human phosphoglycerate kinase 1 promoter"

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