- 载体名称:
- pLV3-U6-MCS-shRNA-Blast
- 载体抗性:
- Ampicillin
- 载体长度:
- 6805 bp
- 载体类型:
- RNA interference
- 复制子:
- ori
- 宿主:
- Mammalian cells, Lentivirus
- 筛选标记:
- Blast
- 启动子:
- hPGK
- 5'引物:
- U6-F:GAGGGCCTATTTCCCATGA
pLV3-U6-MCS-shRNA-Blast 载体载体图谱
pLV3-U6-MCS-shRNA-Blast 载体载体序列
LOCUS 62056_15680 6805 bp DNA circular SYN 01-JAN-1980 DEFINITION synthetic circular DNA. ACCESSION . VERSION . KEYWORDS . SOURCE synthetic DNA construct ORGANISM synthetic DNA construct REFERENCE 1 (bases 1 to 6805) AUTHORS . TITLE Direct Submission FEATURES Location/Qualifiers source 1..6805 /mol_type="other DNA" /organism="synthetic DNA construct" promoter 7..507 /label=hPGK promoter /note="human phosphoglycerate kinase 1 promoter" CDS 535..930 /label=BSD /note="blasticidin S deaminase" LTR 1011..1244 /label=3' LTR (Delta-U3) /note="self-inactivating 3' long terminal repeat (LTR) from HIV-1" polyA_signal 1316..1450 /label=SV40 poly(A) signal /note="SV40 polyadenylation signal" rep_origin 1477..1612 /label=SV40 ori /note="SV40 origin of replication" promoter complement(1633..1651) /label=T7 promoter /note="promoter for bacteriophage T7 RNA polymerase" primer_bind complement(1661..1677) /label=M13 fwd /note="common sequencing primer, one of multiple similar variants" rep_origin 1819..2274 /label=f1 ori /note="f1 bacteriophage origin of replication; arrow indicates direction of (+) strand synthesis" promoter 2300..2404 /label=AmpR promoter CDS 2405..3262 /label=AmpR /note="beta-lactamase" rep_origin 3436..4024 /label=ori /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of replication" protein_bind 4312..4333 /label=CAP binding site /note="CAP binding activates transcription in the presence of cAMP." promoter 4348..4378 /label=lac promoter /note="promoter for the E. coli lac operon" protein_bind 4386..4402 /label=lac operator /note="The lac repressor binds to the lac operator to inhibit transcription in E. coli. This inhibition can be relieved by adding lactose or isopropyl-beta-D-thiogalactopyranoside (IPTG)." primer_bind 4410..4426 /label=M13 rev /note="common sequencing primer, one of multiple similar variants" promoter 4447..4465 /label=T3 promoter /note="promoter for bacteriophage T3 RNA polymerase" promoter 4493..4719 /label=RSV promoter /note="Rous sarcoma virus enhancer/promoter" LTR 4720..4900 /label=5' LTR (truncated) /note="truncated 5' long terminal repeat (LTR) from HIV-1" misc_feature 4947..5072 /label=HIV-1 Psi /note="packaging signal of human immunodeficiency virus type 1" misc_feature 5565..5798 /label=RRE /note="The Rev response element (RRE) of HIV-1 allows for Rev-dependent mRNA export from the nucleus to the cytoplasm." CDS 5983..6027 /label=gp41 peptide /note="antigenic peptide corresponding to amino acids 655 to 669 of the HIV envelope protein gp41 (Lutje Hulsik et al., 2013)" CDS 6176..6217 /note="Protein Tat from Human immunodeficiency virus type 1 group M subtype B (isolate WMJ22). Accession#: P12509" promoter 6325..6565 /label=U6 promoter /note="RNA polymerase III promoter for human U6 snRNA" misc_feature 6636..6753 /label=cPPT/CTS /note="central polypurine tract and central termination sequence of HIV-1" promoter 6802..6805 /label=hPGK promoter /note="human phosphoglycerate kinase 1 promoter"
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