LOCUS V040963 7808 bp DNA circular SYN 01-JAN-1980 DEFINITION synthetic circular DNA. ACCESSION V040963 VERSION V040963 KEYWORDS . SOURCE . ORGANISM . . FEATURES Location/Qualifiers enhancer 202..581 /note="human cytomegalovirus immediate early enhancer" /label="CMV enhancer" promoter 582..785 /note="human cytomegalovirus (CMV) immediate early promoter" /label="CMV promoter" promoter 830..848 /note="promoter for bacteriophage T7 RNA polymerase" /label="T7 promoter" CDS 872..1579 /codon_start=1 /note="mammalian codon-optimized" /product="monomeric derivative of DsRed fluorescent protein (Shaner et al., 2004)" /transl_table=1 /translation="MVSKGEEDNMAIIKEFMRFKVHMEGSVNGHEFEIEGEGEGRPYEG TQTAKLKVTKGGPLPFAWDILSPQFMYGSKAYVKHPADIPDYLKLSFPEGFKWERVMNF EDGGVVTVTQDSSLQDGEFIYKVKLRGTNFPSDGPVMQKKTMGWEASSERMYPEDGALK GEIKQRLKLKDGGHYDAEVKTTYKAKKPVQLPGAYNVNIKLDITSHNEDYTIVEQYERA EGRHSTGGMDELYK" /label="mCherry" CDS 1616..3346 /label="IGF2BP1(NM_006546)" /note="IGF2BP1(NM_006546)" /gene="IGF2BP1" CDS 3353..3379 /codon_start=1 /product="HA (human influenza hemagglutinin) epitope tag" /transl_table=1 /translation="YPYDVPDYA" /label="HA" CDS 3383..3409 /codon_start=1 /product="HA (human influenza hemagglutinin) epitope tag" /transl_table=1 /translation="YPYDVPDYA" /label="HA" CDS 3413..3439 /codon_start=1 /product="HA (human influenza hemagglutinin) epitope tag" /transl_table=1 /translation="YPYDVPDYA" /label="HA" CDS 3446..3472 /codon_start=1 /product="HA (human influenza hemagglutinin) epitope tag" /transl_table=1 /translation="YPYDVPDYA" /label="HA" CDS 3476..3502 /codon_start=1 /product="HA (human influenza hemagglutinin) epitope tag" /transl_table=1 /translation="YPYDVPDYA" /label="HA" CDS 3506..3532 /codon_start=1 /product="HA (human influenza hemagglutinin) epitope tag" /transl_table=1 /translation="YPYDVPDYA" /label="HA" polyA_signal 3570..3794 /note="bovine growth hormone polyadenylation signal" /label="bGH poly(A) signal" rep_origin 3840..4268 /direction=RIGHT /note="f1 bacteriophage origin of replication; arrow indicates direction of (+) strand synthesis" /label="f1 ori" promoter 4282..4611 /note="SV40 enhancer and early promoter" /label="SV40 promoter" CDS 4678..5277 /codon_start=1 /gene="pac from Streptomyces alboniger" /note="confers resistance to puromycin" /product="puromycin N-acetyltransferase" /transl_table=1 /translation="MTEYKPTVRLATRDDVPRAVRTLAAAFADYPATRHTVDPDRHIER VTELQELFLTRVGLDIGKVWVADDGAAVAVWTTPESVEAGAVFAEIGPRMAELSGSRLA AQQQMEGLLAPHRPKEPAWFLATVGVSPDHQGKGLGSAVVLPGVEAAERAGVPAFLETS APRNLPFYERLGFTVTADVEVPEGPRTWCMTRKPGA*" /label="PuroR" polyA_signal 5451..5572 /note="SV40 polyadenylation signal" /label="SV40 poly(A) signal" primer_bind complement(5621..5637) /note="common sequencing primer, one of multiple similar variants" /label="M13 rev" protein_bind 5645..5661 /bound_moiety="lac repressor encoded by lacI" /note="The lac repressor binds to the lac operator to inhibit transcription in E. coli. This inhibition can be relieved by adding lactose or isopropyl-β-D-thiogalactopyranoside (IPTG)." /label="lac operator" promoter complement(5669..5699) /note="promoter for the E. coli lac operon" /label="lac promoter" protein_bind 5714..5735 /bound_moiety="E. coli catabolite activator protein" /note="CAP binding activates transcription in the presence of cAMP." /label="CAP binding site" rep_origin complement(6023..6608) /direction=LEFT /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of replication" /label="ori" CDS complement(6779..7639) /codon_start=1 /gene="bla" /note="confers resistance to ampicillin, carbenicillin, and related antibiotics" /product="β-lactamase" /transl_table=1 /translation="MSIQHFRVALIPFFAAFCLPVFA,HPETLVKVKDAEDQLGARVGY IELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEY SPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR WEPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRS ALPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGA SLIKHW*" /label="AmpR" promoter complement(7640..7744) /gene="bla" /label="AmpR promoter" ORIGIN 1 gcactctcag tacaatctgc tctgatgccg catagttaag ccagtatctg ctccctgctt 61 gtgtgttgga ggtcgctgag tagtgcgcga gcaaaattta agctacaaca aggcaaggct 121 tgaccgacaa ttgcatgaag aatctgctta gggttaggcg ttttgcgctg cttcgcgatg 181 tacgggccag atatacgcgt tgacattgat tattgactag ttattaatag taatcaatta 241 cggggtcatt agttcatagc ccatatatgg agttccgcgt tacataactt acggtaaatg 301 gcccgcctgg ctgaccgccc aacgaccccc gcccattgac gtcaataatg acgtatgttc 361 ccatagtaac gccaataggg actttccatt gacgtcaatg ggtggagtat ttacggtaaa 421 ctgcccactt ggcagtacat caagtgtatc atatgccaag tacgccccct attgacgtca 481 atgacggtaa atggcccgcc tggcattatg cccagtacat gaccttatgg gactttccta 541 cttggcagta catctacgta ttagtcatcg ctattaccat ggtgatgcgg ttttggcagt 601 acatcaatgg gcgtggatag cggtttgact cacggggatt tccaagtctc caccccattg 661 acgtcaatgg gagtttgttt tggcaccaaa atcaacggga ctttccaaaa tgtcgtaaca 721 actccgcccc attgacgcaa atgggcggta ggcgtgtacg gtgggaggtc tatataagca 781 gagctctctg gctaactaga gaacccactg cttactggct tatcgaaatt aatacgactc 841 actataggga gacccaagct ggctagccac catggtgagc aagggcgagg aggataacat 901 ggccatcatc aaggagttca tgcgcttcaa ggtgcacatg gagggctccg tgaacggcca 961 cgagttcgag atcgagggcg agggcgaggg ccgcccctac gagggcaccc agaccgccaa 1021 gctgaaggtg accaagggtg gccccctgcc cttcgcctgg gacatcctgt cccctcagtt 1081 catgtacggc tccaaggcct acgtgaagca ccccgccgac atccccgact acttgaagct 1141 gtccttcccc gagggcttca agtgggagcg cgtgatgaac ttcgaggacg gcggcgtggt 1201 gaccgtgacc caggactcct ccctgcagga cggcgagttc atctacaagg tgaagctgcg 1261 cggcaccaac ttcccctccg acggccccgt aatgcagaag aagaccatgg gctgggaggc 1321 ctcctccgag cggatgtacc ccgaggacgg cgccctgaag ggcgagatca agcagaggct 1381 gaagctgaag gacggcggcc actacgacgc tgaggtcaag accacctaca aggccaagaa 1441 gcccgtgcag ctgcccggcg cctacaacgt caacatcaag ttggacatca cctcccacaa 1501 cgaggactac accatcgtgg aacagtacga acgcgccgag ggccgccact ccaccggcgg 1561 catggacgag ctgtacaagg gaggtggagg tagtggagga ggcggatcaa gcttcatgaa 1621 caagctttac atcggcaacc tcaacgagag cgtgaccccc gcggacttgg agaaagtgtt 1681 tgcggagcac aagatctcct acagcggcca gttcttggtc aaatccggct acgccttcgt 1741 ggactgcccg gacgagcact gggcgatgaa ggccatcgaa actttctccg ggaaagtaga 1801 attacaagga aaacgcttag agattgaaca ttcggtgccc aaaaaacaaa ggagccggaa 1861 aattcaaatc cgaaatattc caccccagct ccgatgggaa gtactggaca gcctgctggc 1921 tcagtatggt acagtagaga actgtgagca agtgaacacc gagagtgaga cggcagtggt 1981 gaatgtcacc tattccaacc gggagcagac caggcaagcc atcatgaagc tgaatggcca 2041 ccagttggag aaccatgccc tgaaggtctc ctacatcccc gatgagcaga tagcacaggg 2101 acctgagaat gggcgccgag ggggctttgg ctctcggggt cagccccgcc agggctcacc 2161 tgtggcagcg ggggccccag ccaagcagca gcaagtggac atcccccttc ggctcctggt 2221 gcccacccag tatgtgggtg ccattattgg caaggagggg gccaccatcc gcaacatcac 2281 aaaacagacc cagtccaaga tagacgtgca taggaaggag aacgcaggtg cagctgaaaa 2341 agccatcagt gtgcactcca cccctgaggg ctgctcctcc gcttgtaaga tgatcttgga 2401 gattatgcat aaagaggcta aggacaccaa aacggctgac gaggttcccc tgaagatcct 2461 ggcccataat aactttgtag ggcgtctcat tggcaaggaa ggacggaacc tgaagaaggt 2521 agagcaagat accgagacaa aaatcaccat ctcctcgttg caagacctta ccctttacaa 2581 ccctgagagg accatcactg tgaagggggc catcgagaat tgttgcaggg ccgagcagga 2641 aataatgaag aaagttcggg aggcctatga gaatgatgtg gctgccatga gcctgcagtc 2701 tcacctgatc cctggcctga acctggctgc tgtaggtctt ttcccagctt catccagcgc 2761 agtcccgccg cctcccagca gcgttactgg ggctgctccc tatagctcct ttatgcaggc 2821 tcccgagcag gagatggtgc aggtgtttat ccccgcccag gcagtgggcg ccatcatcgg 2881 caagaagggg cagcacatca aacagctctc ccggtttgcc agcgcctcca tcaagattgc 2941 accacccgaa acacctgact ccaaagttcg tatggttatc atcactggac cgccagaggc 3001 ccaattcaag gctcagggaa gaatctatgg caaactcaag gaggagaact tctttggtcc 3061 caaggaggaa gtgaagctgg agacccacat acgtgtgcca gcatcagcag ctggccgggt 3121 cattggcaaa ggtggaaaaa cggtgaacga gttgcagaat ttgacggcag ctgaggtggt 3181 agtaccaaga gaccagaccc ctgatgagaa cgaccaggtc atcgtgaaaa tcatcggaca 3241 tttctatgcc agtcagatgg ctcaacggaa gatccgagac atcctggccc aggttaagca 3301 gcagcatcag aagggacaga gtaaccaggc ccaggcacgg aggaagctcg agtatccgta 3361 tgacgttccg gattacgcga cctatccgta cgacgttccg gattacgctt cctacccata 3421 cgacgtaccg gattacgcgc tcgagtaccc atacgacgta cctgattatg caacttatcc 3481 ttatgatgta cctgattatg ctagctatcc ttatgatgtc ccagactacg catagtgagg 3541 gcccgtttaa acccgctgat cagcctcgac tgtgccttct agttgccagc catctgttgt 3601 ttgcccctcc cccgtgcctt ccttgaccct ggaaggtgcc actcccactg tcctttccta 3661 ataaaatgag gaaattgcat cgcattgtct gagtaggtgt cattctattc tggggggtgg 3721 ggtggggcag gacagcaagg gggaggattg ggaagacaat agcaggcatg ctggggatgc 3781 ggtgggctct atggcttctg aggcggaaag aaccagctgg ggctctaggg ggtatcccca 3841 cgcgccctgt agcggcgcat taagcgcggc gggtgtggtg gttacgcgca gcgtgaccgc 3901 tacacttgcc agcgccctag cgcccgctcc tttcgctttc ttcccttcct ttctcgccac 3961 gttcgccggc tttccccgtc aagctctaaa tcgggggctc cctttagggt tccgatttag 4021 tgctttacgg cacctcgacc ccaaaaaact tgattagggt gatggttcac gtagtgggcc 4081 atcgccctga tagacggttt ttcgcccttt gacgttggag tccacgttct ttaatagtgg 4141 actcttgttc caaactggaa caacactcaa ccctatctcg gtctattctt ttgatttata 4201 agggattttg ccgatttcgg cctattggtt aaaaaatgag ctgatttaac aaaaatttaa 4261 cgcgaattaa ttctgtggaa tgtgtgtcag ttagggtgtg gaaagtcccc aggctcccca 4321 gcaggcagaa gtatgcaaag catgcatctc aattagtcag caaccaggtg tggaaagtcc 4381 ccaggctccc cagcaggcag aagtatgcaa agcatgcatc tcaattagtc agcaaccata 4441 gtcccgcccc taactccgcc catcccgccc ctaactccgc ccagttccgc ccattctccg 4501 ccccatggct gactaatttt ttttatttat gcagaggccg aggccgcctc tgcctctgag 4561 ctattccaga agtagtgagg aggctttttt ggaggcctag gcttttgcaa aaagctcccg 4621 ggagcttgta tatccatttt cggatctgat caagagacag gatgaggatc gtttcgcatg 4681 accgagtaca agcccacggt gcgcctcgcc acccgcgacg acgtcccccg ggccgtacgc 4741 accctcgccg ccgcgttcgc cgactacccc gccacgcgcc acaccgtcga cccggaccgc 4801 cacatcgagc gggtcaccga gctgcaagaa ctcttcctca cgcgcgtcgg gctcgacatc 4861 ggcaaggtgt gggtcgcgga cgacggcgcc gcggtggcgg tctggaccac gccggagagc 4921 gtcgaagcgg gggcggtgtt cgccgagatc ggcccgcgca tggccgagtt gagcggttcc 4981 cggctggccg cgcagcaaca gatggaaggc ctcctggcgc cgcaccggcc caaggagccc 5041 gcgtggttcc tggccaccgt cggcgtctcg cccgaccacc agggcaaggg tctgggcagc 5101 gccgtcgtgc tccccggagt ggaggcggcc gagcgcgccg gggtgcccgc cttcctggag 5161 acctccgcgc cccgcaacct ccccttctac gagcggctcg gcttcaccgt caccgccgac 5221 gtcgaggtgc ccgaaggacc gcgcacctgg tgcatgaccc gcaagcccgg tgcctgagcg 5281 ggactctggg gttcgaaatg accgaccaag cgacgcccaa cctgccatca cgagatttcg 5341 attccaccgc cgccttctat gaaaggttgg gcttcggaat cgttttccgg gacgccggct 5401 ggatgatcct ccagcgcggg gatctcatgc tggagttctt cgcccacccc aacttgttta 5461 ttgcagctta taatggttac aaataaagca atagcatcac aaatttcaca aataaagcat 5521 ttttttcact gcattctagt tgtggtttgt ccaaactcat caatgtatct tatcatgtct 5581 gtataccgtc gacctctagc tagagcttgg cgtaatcatg gtcatagctg tttcctgtgt 5641 gaaattgtta tccgctcaca attccacaca acatacgagc cggaagcata aagtgtaaag 5701 cctggggtgc ctaatgagtg agctaactca cattaattgc gttgcgctca ctgcccgctt 5761 tccagtcggg aaacctgtcg tgccagctgc attaatgaat cggccaacgc gcggggagag 5821 gcggtttgcg tattgggcgc tcttccgctt cctcgctcac tgactcgctg cgctcggtcg 5881 ttcggctgcg gcgagcggta tcagctcact caaaggcggt aatacggtta tccacagaat 5941 caggggataa cgcaggaaag aacatgtgag caaaaggcca gcaaaaggcc aggaaccgta 6001 aaaaggccgc gttgctggcg tttttccata ggctccgccc ccctgacgag catcacaaaa 6061 atcgacgctc aagtcagagg tggcgaaacc cgacaggact ataaagatac caggcgtttc 6121 cccctggaag ctccctcgtg cgctctcctg ttccgaccct gccgcttacc ggatacctgt 6181 ccgcctttct cccttcggga agcgtggcgc tttctcatag ctcacgctgt aggtatctca 6241 gttcggtgta ggtcgttcgc tccaagctgg gctgtgtgca cgaacccccc gttcagcccg 6301 accgctgcgc cttatccggt aactatcgtc ttgagtccaa cccggtaaga cacgacttat 6361 cgccactggc agcagccact ggtaacagga ttagcagagc gaggtatgta ggcggtgcta 6421 cagagttctt gaagtggtgg cctaactacg gctacactag aagaacagta tttggtatct 6481 gcgctctgct gaagccagtt accttcggaa aaagagttgg tagctcttga tccggcaaac 6541 aaaccaccgc tggtagcggt ttttttgttt gcaagcagca gattacgcgc agaaaaaaag 6601 gatctcaaga agatcctttg atcttttcta cggggtctga cgctcagtgg aacgaaaact 6661 cacgttaagg gattttggtc atgagattat caaaaaggat cttcacctag atccttttaa 6721 attaaaaatg aagttttaaa tcaatctaaa gtatatatga gtaaacttgg tctgacagtt 6781 accaatgctt aatcagtgag gcacctatct cagcgatctg tctatttcgt tcatccatag 6841 ttgcctgact ccccgtcgtg tagataacta cgatacggga gggcttacca tctggcccca 6901 gtgctgcaat gataccgcga gacccacgct caccggctcc agatttatca gcaataaacc 6961 agccagccgg aagggccgag cgcagaagtg gtcctgcaac tttatccgcc tccatccagt 7021 ctattaattg ttgccgggaa gctagagtaa gtagttcgcc agttaatagt ttgcgcaacg 7081 ttgttgccat tgctacaggc atcgtggtgt cacgctcgtc gtttggtatg gcttcattca 7141 gctccggttc ccaacgatca aggcgagtta catgatcccc catgttgtgc aaaaaagcgg 7201 ttagctcctt cggtcctccg atcgttgtca gaagtaagtt ggccgcagtg ttatcactca 7261 tggttatggc agcactgcat aattctctta ctgtcatgcc atccgtaaga tgcttttctg 7321 tgactggtga gtactcaacc aagtcattct gagaatagtg tatgcggcga ccgagttgct 7381 cttgcccggc gtcaatacgg gataataccg cgccacatag cagaacttta aaagtgctca 7441 tcattggaaa acgttcttcg gggcgaaaac tctcaaggat cttaccgctg ttgagatcca 7501 gttcgatgta acccactcgt gcacccaact gatcttcagc atcttttact ttcaccagcg 7561 tttctgggtg agcaaaaaca ggaaggcaaa atgccgcaaa aaagggaata agggcgacac 7621 ggaaatgttg aatactcata ctcttccttt ttcaatatta ttgaagcatt tatcagggtt 7681 attgtctcat gagcggatac atatttgaat gtatttagaa aaataaacaa ataggggttc 7741 cgcgcacatt tccccgaaaa gtgccacctg acgtcgacgg atcgggagat ctcccgatcc 7801 cctatggt //