pSKA563 载体 (V015319)

我们所展示的质粒图谱主要是从文献和开放数据库中收集而来,主要是为了方便研究工作,其中一小部分质粒进行了质量控制,可供科学家使用。

所有的产品都严格仅供科学研究使用,不能应用于临床试验,包括人体摄入、注射或外用的药理学用途。

确保质粒的关键元件正确,但是我们并不能保证实验结果。页面展示的图谱序列为理论序列,可能与测序结果不一致,请自行比对后确定是否满足要求。(如果测过序,本页面一般会提供下载)

开放数据库中的大多数载体序列都没有被完全测序。如果实际序列与参考序列的相似度超过99%,则将其视为正确。

由于科学研究是在探索未知,具有很大的不确定性,在任何情况下,我们都不承担超出质粒本身的额外经济损失或责任。

载体名称:
pSKA563
载体抗性:
Ampicillin
载体长度:
8589 bp
载体类型:
Cloning vector
复制子:
ori
载体来源:
Aoki SK, Lillacci G, Gupta A, Baumschlager A

pSKA563 载体图谱

pSKA5638589 bp4008001200160020002400280032003600400044004800520056006000640068007200760080008400UP elementPsigWsRBSV5 tagaraCsRBSFLAGsuperfolder GFPrrnB T1 terminatorrrnB T2 terminatorUP elementPsigWsRBSV5 tagaraCsRBSFLAGsuperfolder GFPrrnB T1T2 terminatorT7 terminatorTranscriptional activator protein LuxRPconstitutivePluxRBS5000ECF RNA polymerase sigma factor SigWrrnB T1 terminatororilambda t0 terminatorAmpRAmpR promoter

质粒操作方法

1. 发货形式:质粒干粉(常温运输,存于-20度,请务必先转化提质粒后使用)

2. 收到质粒干粉后请先5000rpm离心1min,再加入20μl ddH2O溶解质粒;(质粒复测的浓度有时候与标称值差距较大,这可能是因为冻干质粒在管中的位置、复溶效率、测量偏差以及管壁的吸附导致,因此建议先转化提质粒后再使用)

3. 取1支100μl 感受态于冰上解冻10min,加入2μl质粒,再冰浴30min后,42℃热激60s,不要搅动,再冰浴2min;

4. 加入900μl无抗的LB液体培养基,180rpm震荡37℃培养45min (30℃培养1-1.5小时);

5. 6000rpm离心5min,仅留100μl上清液重悬细菌沉淀,并涂布至目标质粒抗性的LB平板上;

6. 将平板倒置37℃培养14h,如果要求是30℃则培养20h; (菌落过多则将质粒稀释后再转化;没有菌落则加入10μl质粒转化;建议不要直接转表达感受态, 要先转克隆感受态,重提质粒后再导入表达感受态);

7. 挑取单菌落至LB液体培养基中,加入对应抗生素,220rpm震荡培养14h,根据实验需要和质粒提取试剂盒说明书提取质粒。

pSKA563 载体序列

LOCUS       V015319                 8589 bp    DNA     circular SYN 26-JUN-2019
DEFINITION  Exported.
ACCESSION   V015319
VERSION     V015319
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
            .
REFERENCE   1  (bases 1 to 8589)
  AUTHORS   Aoki SK, Lillacci G, Gupta A, Baumschlager A, Schweingruber D,
            Khammash M.
  TITLE     A universal biomolecular integral feedback controller for robust
            perfect adaptation
  JOURNAL   Nature 570, 533-537 (2019)
   PUBMED   31217585
REFERENCE   2  (bases 1 to 8589)
  AUTHORS   Aoki SK, Lillacci G.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2019) Biosystems Science and Engineering, ETH
            Zurich, Mattenstrasse 26, Basel 4058, Switzerland
REFERENCE   3  (bases 1 to 8589)
  AUTHORS   .
  TITLE     Direct Submission
COMMENT     SGRef: number: 1; type: "Journal Article"; journalName: "Nature 570,
            533-537 (2019)"
            SGRef: number: 2; type: "Journal Article"; journalName: "Submitted
            (09-APR-2019) Biosystems Science and Engineering, ETH Zurich,
            Mattenstrasse 26, Basel 4058, Switzerland"
FEATURES             Location/Qualifiers
     source          1..8589
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     regulatory      26..47
                     /label="UP element"
                     /note="UP element"
                     /regulatory_class="enhancer"
     regulatory      50..85
                     /label="PsigW"
                     /note="PsigW"
                     /regulatory_class="promoter"
     regulatory      112..118
                     /label="sRBS"
                     /note="sRBS"
                     /regulatory_class="ribosome_binding_site"
     CDS             128..169
                     /label="V5 tag"
                     /note="epitope tag from simian virus 5"
     CDS             176..1048
                     /label="araC"
                     /note="L-arabinose regulatory protein"
     regulatory      1139..1145
                     /label="sRBS"
                     /note="sRBS"
                     /regulatory_class="ribosome_binding_site"
     CDS             1155..1178
                     /label="FLAG"
                     /note="FLAG(R) epitope tag, followed by an enterokinase
                     cleavage site"
     CDS             1191..1901
                     /label="superfolder GFP"
                     /note="GFP variant that folds robustly even when fused to
                     poorly folded proteins (Pedelacq et al., 2006)"
     terminator      2206..2292
                     /label="rrnB T1 terminator"
                     /note="transcription terminator T1 from the E. coli rrnB
                     gene"
     terminator      2384..2411
                     /label="rrnB T2 terminator"
                     /note="transcription terminator T2 from the E. coli rrnB
                     gene"
     regulatory      2494..2515
                     /label="UP element"
                     /note="UP element"
                     /regulatory_class="enhancer"
     regulatory      2518..2553
                     /label="PsigW"
                     /note="PsigW"
                     /regulatory_class="promoter"
     regulatory      2580..2586
                     /label="sRBS"
                     /note="sRBS"
                     /regulatory_class="ribosome_binding_site"
     CDS             2596..2637
                     /label="V5 tag"
                     /note="epitope tag from simian virus 5"
     CDS             2644..3516
                     /label="araC"
                     /note="L-arabinose regulatory protein"
     regulatory      3607..3613
                     /label="sRBS"
                     /note="sRBS"
                     /regulatory_class="ribosome_binding_site"
     CDS             3623..3646
                     /label="FLAG"
                     /note="FLAG(R) epitope tag, followed by an enterokinase
                     cleavage site"
     CDS             3659..4369
                     /label="superfolder GFP"
                     /note="GFP variant that folds robustly even when fused to
                     poorly folded proteins (Pedelacq et al., 2006)"
     regulatory      4472..4897
                     /label="rrnB T1T2 terminator"
                     /note="rrnB T1T2 terminator"
                     /regulatory_class="terminator"
     terminator      complement(4973..5020)
                     /label="T7 terminator"
                     /note="transcription terminator for bacteriophage T7 RNA
                     polymerase"
     CDS             complement(5024..5773)
                     /gene="luxR"
                     /label="Transcriptional activator protein LuxR"
                     /note="Transcriptional activator protein LuxR from
                     Aliivibrio fischeri. Accession#: P12746"
     regulatory      complement(5802..5855)
                     /label="Pconstitutive"
                     /note="Pconstitutive"
                     /regulatory_class="promoter"
     regulatory      5906..5970
                     /label="Plux"
                     /note="Plux"
                     /regulatory_class="promoter"
     regulatory      5906..5925
                     /label="LuxR binding site"
                     /note="LuxR binding site"
                     /regulatory_class="other"
     regulatory      5971..5996
                     /label="RBS5000"
                     /note="RBS5000"
                     /regulatory_class="ribosome_binding_site"
     CDS             5997..6557
                     /gene="sigW"
                     /label="ECF RNA polymerase sigma factor SigW"
                     /note="ECF RNA polymerase sigma factor SigW from Bacillus
                     subtilis (strain 168). Accession#: Q45585"
     terminator      complement(6575..6618)
                     /label="rrnB T1 terminator"
                     /note="transcription terminator T1 from the E. coli rrnB
                     gene"
     rep_origin      complement(6760..7348)
                     /direction=LEFT
                     /label="ori"
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
                     replication"
     terminator      complement(7436..7530)
                     /label="lambda t0 terminator"
                     /note="transcription terminator from phage lambda"
     CDS             complement(7563..8420)
                     /label="AmpR"
                     /note="beta-lactamase"
     promoter        complement(8421..8525)
                     /label="AmpR promoter"