我们所展示的质粒图谱主要是从文献和开放数据库中收集而来,主要是为了方便研究工作,其中一小部分质粒进行了质量控制,可供科学家使用。
所有的产品都严格仅供科学研究使用,不能应用于临床试验,包括人体摄入、注射或外用的药理学用途。
确保质粒的关键元件正确,但是我们并不能保证实验结果。页面展示的图谱序列为理论序列,可能与测序结果不一致,请自行比对后确定是否满足要求。(如果测过序,本页面一般会提供下载)
开放数据库中的大多数载体序列都没有被完全测序。如果实际序列与参考序列的相似度超过99%,则将其视为正确。
由于科学研究是在探索未知,具有很大的不确定性,在任何情况下,我们都不承担超出质粒本身的额外经济损失或责任。
- 载体名称:
- pBBR4pemIK-GW
- 载体抗性:
- Chloramphenicol
- 载体长度:
- 7368 bp
- 载体类型:
- Cloning vector
- 复制子:
- pBBR1 oriV
- 载体来源:
- Burbank L, Wei W.
- 启动子:
- lac UV5
pBBR4pemIK-GW 载体图谱
质粒操作方法
1. 发货形式:质粒干粉(常温运输,存于-20度,请务必先转化提质粒后使用)
2. 收到质粒干粉后请先5000rpm离心1min,再加入20μl ddH2O溶解质粒;(质粒复测的浓度有时候与标称值差距较大,这可能是因为冻干质粒在管中的位置、复溶效率、测量偏差以及管壁的吸附导致,因此建议先转化提质粒后再使用)
3. 取1支100μl 感受态于冰上解冻10min,加入2μl质粒,再冰浴30min后,42℃热激60s,不要搅动,再冰浴2min;
4. 加入900μl无抗的LB液体培养基,180rpm震荡37℃培养45min (30℃培养1-1.5小时);
5. 6000rpm离心5min,仅留100μl上清液重悬细菌沉淀,并涂布至目标质粒抗性的LB平板上;
6. 将平板倒置37℃培养14h,如果要求是30℃则培养20h; (菌落过多则将质粒稀释后再转化;没有菌落则加入10μl质粒转化;建议不要直接转表达感受态, 要先转克隆感受态,重提质粒后再导入表达感受态);
7. 挑取单菌落至LB液体培养基中,加入对应抗生素,220rpm震荡培养14h,根据实验需要和质粒提取试剂盒说明书提取质粒。
pBBR4pemIK-GW 载体序列
LOCUS 62056_3730 7368 bp DNA circular SYN 06-DEC-2019 DEFINITION Cloning vector pBBR4pemIK-GW, complete sequence. ACCESSION MN044102 VERSION . KEYWORDS . SOURCE synthetic DNA construct ORGANISM synthetic DNA construct REFERENCE 1 (bases 1 to 7368) AUTHORS Burbank L, Wei W. TITLE Broad-Host-Range Plasmids for Constitutive and Inducible Gene Expression in the Absence of Antibiotic Selection JOURNAL Microbiol Resour Announc 8 (36), e00769-19 (2019) PUBMED 31488530 REFERENCE 2 (bases 1 to 7368) AUTHORS Burbank LP, Wei W. TITLE Direct Submission JOURNAL Submitted (06-JUN-2019) Crop Diseases Pests and Genetics Research Unit, USDA Agricultural Research Service, 9611 S Riverbend Ave, Parlier, CA 93648, USA REFERENCE 3 (bases 1 to 7368) AUTHORS . TITLE Direct Submission COMMENT SGRef: number: 1; type: "Journal Article"; journalName: "Microbiol Resour Announc"; date: "2019"; volume: "8"; issue: "36"; pages: "e00769-19" COMMENT SGRef: number: 2; type: "Journal Article"; journalName: "Submitted (06-JUN-2019) Crop Diseases Pests and Genetics Research Unit, USDA Agricultural Research Service, 9611 S Riverbend Ave, Parlier, CA 93648, USA" COMMENT ##Assembly-Data-START## Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..7368 /mol_type="other DNA" /organism="synthetic DNA construct" rep_origin 1..770 /label=pBBR1 oriV /note="replication origin of the broad-host-range plasmid pBBR1 from Bordetella bronchiseptica; requires the pBBR1 Rep protein for replication" CDS 771..1430 /label=pBBR1 Rep /note="replication protein for the broad-host-range plasmid pBBR1 from Bordetella bronchiseptica" primer_bind 2140..2156 /label=M13 fwd /note="common sequencing primer, one of multiple similar variants" promoter 2166..2184 /label=T7 promoter /note="promoter for bacteriophage T7 RNA polymerase" primer_bind 2217..2233 /label=SK primer /note="common sequencing primer, one of multiple similar variants" CDS complement(2293..2655) /codon_start=1 /transl_table=11 /product="mRNA interferase PemK" /label=mRNA interferase PemK /protein_id="QDJ95328.1" /translation="MGRCSSSRTRTDMKRGDVYMVDLEPTAGHEQRGHRPVVVISSERF NRLTSCPVILPITNGGEFASRLGFAVELLGTITTGVVRCDQPRALDLLARNARKVESLP PNILADVLAKAVTIFQ" CDS complement(2616..2879) /codon_start=1 /transl_table=11 /product="antitoxin PemI" /label=antitoxin PemI /protein_id="QDJ95329.1" /translation="MHTTNLRKVGGSIMLAVPPAFLDQLHLEVGATVGLAVTDGRLVIE PVLHPQYTLDQLLAEAEASGAYPLPPEEREWVDAPAVGRELI" protein_bind 2965..3089 /label=attR1 /note="recombination site for the Gateway(R) LR reaction" promoter 3114..3144 /label=lac UV5 promoter /note="E. coli lac promoter with an 'up' mutation" CDS 3198..3854 /label=CmR /note="chloramphenicol acetyltransferase" CDS 4199..4501 /label=ccdB /note="CcdB, a bacterial toxin that poisons DNA gyrase" protein_bind complement(4545..4669) /label=attR2 /note="recombination site for the Gateway(R) LR reaction" primer_bind complement(4685..4701) /label=KS primer /note="common sequencing primer, one of multiple similar variants" promoter complement(4731..4749) /label=T3 promoter /note="promoter for bacteriophage T3 RNA polymerase" primer_bind complement(4770..4786) /label=M13 rev /note="common sequencing primer, one of multiple similar variants" protein_bind complement(4794..4810) /label=lac operator /note="The lac repressor binds to the lac operator to inhibit transcription in E. coli. This inhibition can be relieved by adding lactose or isopropyl-beta-D-thiogalactopyranoside (IPTG)." promoter complement(4818..4848) /label=lac promoter /note="promoter for the E. coli lac operon" protein_bind complement(4863..4884) /label=CAP binding site /note="CAP binding activates transcription in the presence of cAMP." promoter 5112..5183 /label=AmpR promoter CDS 5184..6041 /label=AmpR /note="beta-lactamase"