pCM168 载体 (V008441)

我们所展示的质粒图谱主要是从文献和开放数据库中收集而来,主要是为了方便研究工作,其中一小部分质粒进行了质量控制,可供科学家使用。

所有的产品都严格仅供科学研究使用,不能应用于临床试验,包括人体摄入、注射或外用的药理学用途。

确保质粒的关键元件正确,但是我们并不能保证实验结果。页面展示的图谱序列为理论序列,可能与测序结果不一致,请自行比对后确定是否满足要求。(如果测过序,本页面一般会提供下载)

开放数据库中的大多数载体序列都没有被完全测序。如果实际序列与参考序列的相似度超过99%,则将其视为正确。

由于科学研究是在探索未知,具有很大的不确定性,在任何情况下,我们都不承担超出质粒本身的额外经济损失或责任。

载体名称:
pCM168
载体抗性:
Ampicillin
载体长度:
8074 bp
载体类型:
Insertional cloning vector
复制子:
ori
载体来源:
Marx CJ, Lidstrom ME.

pCM168 载体图谱

pCM1688074 bp400800120016002000240028003200360040004400480052005600600064006800720076008000rrnB T1 terminatorrrnB T2 terminatorT7 terminatorkatAM13 revlac operatorlac promoterCAP binding siteoriAmpRAmpR promoterkatAloxP; Cre-recombinase recognition siteTetRTcRloxPKS primerM13 fwd

质粒操作方法

1. 发货形式:质粒干粉(常温运输,存于-20度,请务必先转化提质粒后使用)

2. 收到质粒干粉后请先5000rpm离心1min,再加入20μl ddH2O溶解质粒;(质粒复测的浓度有时候与标称值差距较大,这可能是因为冻干质粒在管中的位置、复溶效率、测量偏差以及管壁的吸附导致,因此建议先转化提质粒后再使用)

3. 取1支100μl 感受态于冰上解冻10min,加入2μl质粒,再冰浴30min后,42℃热激60s,不要搅动,再冰浴2min;

4. 加入900μl无抗的LB液体培养基,180rpm震荡37℃培养45min (30℃培养1-1.5小时);

5. 6000rpm离心5min,仅留100μl上清液重悬细菌沉淀,并涂布至目标质粒抗性的LB平板上;

6. 将平板倒置37℃培养14h,如果要求是30℃则培养20h; (菌落过多则将质粒稀释后再转化;没有菌落则加入10μl质粒转化;建议不要直接转表达感受态, 要先转克隆感受态,重提质粒后再导入表达感受态);

7. 挑取单菌落至LB液体培养基中,加入对应抗生素,220rpm震荡培养14h,根据实验需要和质粒提取试剂盒说明书提取质粒。

pCM168 载体序列

LOCUS       40924_11336        8074 bp DNA     circular SYN 17-DEC-2018
DEFINITION  Insertional cloning vector pCM168, complete sequence.
ACCESSION   .
VERSION     .
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
REFERENCE   1  (bases 1 to 8074)
  AUTHORS   Marx CJ, Lidstrom ME.
  TITLE     Development of an insertional expression vector system for 
            Methylobacterium extorquens AM1 and generation of null mutants 
            lacking mtdA and/or fch
  JOURNAL   Microbiology (Reading, Engl.) 150 (PT 1), 9-19 (2004)
  PUBMED    14702393
REFERENCE   2  (bases 1 to 8074)
  AUTHORS   Marx CJ, Lidstrom ME.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAY-2003) Microbiology, University of Washington, Box 
            357242, Seattle, WA 98195, USA
REFERENCE   3  (bases 1 to 8074)
  TITLE     Direct Submission
REFERENCE   4  (bases 1 to 8074)
  AUTHORS   .
  TITLE     Direct Submission
COMMENT     SGRef: number: 1; type: "Journal Article"; journalName: 
            "Microbiology (Reading, Engl.) 150 (PT 1), 9-19 (2004)"
COMMENT     SGRef: number: 2; type: "Journal Article"; journalName: "Submitted 
            (22-MAY-2003) Microbiology, University of Washington, Box 357242, 
            Seattle, WA 98195, USA"
COMMENT     SGRef: number: 3; type: "Journal Article"
FEATURES             Location/Qualifiers
     source          1..8074
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     terminator      177..263
                     /label=rrnB T1 terminator
                     /note="transcription terminator T1 from the E. coli rrnB
                     gene"
     terminator      355..382
                     /label=rrnB T2 terminator
                     /note="transcription terminator T2 from the E. coli rrnB
                     gene"
     terminator      609..656
                     /label=T7 terminator
                     /note="transcription terminator for bacteriophage T7 RNA 
                     polymerase"
     CDS             883..1248
                     /codon_start=1
                     /gene="katA"
                     /allele="'katA"
                     /product="catalase"
                     /label=katA
                     /protein_id="AAP75625.1"
                     /translation="DGAMRTDGNHGAQVDYEPNSFGGPKQDPSFSEPPLRIQGDAGRYG
                     WPGDDEDLYGQPKLFWTKVLDEGGRKRLVENIVTSMGDSPRHIQERMIAHWFKVHEDFG
                     RGVAQGLGIDTAQAAAE"
     gene            883..1248
                     /gene="katA"
                     /allele="'katA"
                     /label=katA
     primer_bind     complement(2049..2065)
                     /label=M13 rev
                     /note="common sequencing primer, one of multiple similar 
                     variants"
     protein_bind    complement(2073..2089)
                     /label=lac operator
                     /note="The lac repressor binds to the lac operator to
                     inhibit transcription in E. coli. This inhibition can be 
                     relieved by adding lactose or 
                     isopropyl-beta-D-thiogalactopyranoside (IPTG)."
     promoter        complement(2097..2127)
                     /label=lac promoter
                     /note="promoter for the E. coli lac operon"
     protein_bind    complement(2142..2163)
                     /label=CAP binding site
                     /note="CAP binding activates transcription in the presence
                     of cAMP."
     rep_origin      complement(2451..3039)
                     /direction=LEFT
                     /label=ori
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of 
                     replication"
     CDS             complement(3213..4070)
                     /label=AmpR
                     /note="beta-lactamase"
     promoter        complement(4071..4175)
                     /label=AmpR promoter
     CDS             4493..5390
                     /codon_start=1
                     /gene="katA"
                     /allele="katA'"
                     /product="catalase"
                     /label=katA
                     /protein_id="AAP75627.1"
                     /translation="MQDYHLIEKMAHFNRERIPERVVHAKGYGAYGTFRLTRSLSEFTR
                     AKVLTEVGKDVPMVARFSTVGGESGSADTARDPRGFALKFYTEEGNWDLVGNNTPIFFV
                     RDAIKFSDFIRTQKRDPRTHLKPHWRRWDFWSLSPEAIHQVMFLYSDRGTPKSARFMNG
                     YGSHTFSLWNDRGERHWVKFHFHTKQGIQNFSADEADEVAGKDPDYSSADLSTAIEQGD
                     FPKWKVSVQLMPELDADTYRINPFDLTKVWPHGDYPLIEIGEMELNRNPENYFAEIEQS
                     AFEPSNVVPGIGFSPHKM"
     gene            4493..5390
                     /gene="katA"
                     /allele="katA'"
                     /label=katA
     misc_recomb     5407..5440
                     /note="loxP; Cre-recombinase recognition site"
     protein_bind    5407..5440
                     /label=loxP
                     /bound_moiety="Cre recombinase"
                     /note="Cre-mediated recombination occurs in the 8-bp core 
                     sequence (GCATACAT)."
     CDS             complement(5796..6443)
                     /label=TetR
                     /note="tetracycline resistance regulatory protein"
     CDS             6549..7745
                     /label=TcR
                     /note="tetracycline efflux protein"
     protein_bind    complement(7766..7799)
                     /label=loxP
                     /note="Cre-mediated recombination occurs in the 8-bp core 
                     sequence (ATGTATGC) (Shaw et al., 2021)."
     primer_bind     complement(7813..7829)
                     /label=KS primer
                     /note="common sequencing primer, one of multiple similar 
                     variants"
     primer_bind     8053..8069
                     /label=M13 fwd
                     /note="common sequencing primer, one of multiple similar 
                     variants"