我们所展示的质粒图谱主要是从文献和开放数据库中收集而来，主要是为了方便研究工作，其中一小部分质粒进行了质量控制，可供科学家使用。
所有的产品都严格仅供科学研究使用，不能应用于临床试验，包括人体摄入、注射或外用的药理学用途。
确保质粒的关键元件正确，但是我们并不能保证实验结果。页面展示的图谱序列为理论序列，可能与测序结果不一致，请自行比对后确定是否满足要求。(如果测过序，本页面一般会提供下载)
开放数据库中的大多数载体序列都没有被完全测序。如果实际序列与参考序列的相似度超过99%，则将其视为正确。
由于科学研究是在探索未知，具有很大的不确定性，在任何情况下，我们都不承担超出质粒本身的额外经济损失或责任。
- 载体名称:
- pRK415iq
- 载体抗性:
- Tetracycline
- 载体长度:
- 11912 bp
- 载体类型:
- Broad host range expression vector
- 复制子:
- oriV
- 载体来源:
- Kickstein E, Harms K, Wackernagel W.
pRK415iq 载体图谱
质粒操作方法
1. 发货形式：质粒干粉(常温运输，存于-20度，请务必先转化提质粒后使用)
2. 收到质粒干粉后请先5000rpm离心1min，再加入20μl ddH2O溶解质粒;（质粒复测的浓度有时候与标称值差距较大，这可能是因为冻干质粒在管中的位置、复溶效率、测量偏差以及管壁的吸附导致，因此建议先转化提质粒后再使用）
3. 取1支100μl 感受态于冰上解冻10min，加入2μl质粒，再冰浴30min后，42℃热激60s，不要搅动，再冰浴2min；
4. 加入900μl无抗的LB液体培养基，180rpm震荡37℃培养45min (30℃培养1-1.5小时);
5. 6000rpm离心5min，仅留100μl上清液重悬细菌沉淀，并涂布至目标质粒抗性的LB平板上;
6. 将平板倒置37℃培养14h，如果要求是30℃则培养20h; (菌落过多则将质粒稀释后再转化；没有菌落则加入10μl质粒转化；建议不要直接转表达感受态， 要先转克隆感受态，重提质粒后再导入表达感受态);
7. 挑取单菌落至LB液体培养基中，加入对应抗生素，220rpm震荡培养14h，根据实验需要和质粒提取试剂盒说明书提取质粒。
pRK415iq 载体序列
LOCUS 40924_37128 11912 bp DNA circular SYN 18-DEC-2018
DEFINITION Broad host range expression vector pRK415iq, complete sequence.
ACCESSION .
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 11912)
AUTHORS Kickstein E, Harms K, Wackernagel W.
TITLE Deletions of recBCD or recD influence genetic transformation
differently and are lethal together with a recJ deletion in
Acinetobacter baylyi
JOURNAL Microbiology (Reading, Engl.) 153 (PT 7), 2259-2270 (2007)
PUBMED 17600070
REFERENCE 2 (bases 1 to 11912)
AUTHORS Harms K, Huelter N, de Vries J, Wackernagel W.
TITLE Direct Submission
JOURNAL Submitted (13-FEB-2007) Genetics, Department of Biology and
Environmental Sciences, University of Oldenburg,
Carl-von-Ossietzky-Strasse 9-11, Oldenburg D-26111, Germany
REFERENCE 3 (bases 1 to 11912)
TITLE Direct Submission
REFERENCE 4 (bases 1 to 11912)
AUTHORS .
TITLE Direct Submission
COMMENT SGRef: number: 1; type: "Journal Article"; journalName:
"Microbiology (Reading, Engl.) 153 (PT 7), 2259-2270 (2007)"
COMMENT SGRef: number: 2; type: "Journal Article"; journalName: "Submitted
(13-FEB-2007) Genetics, Department of Biology and Environmental
Sciences, University of Oldenburg, Carl-von-Ossietzky-Strasse 9-11,
Oldenburg D-26111, Germany"
COMMENT SGRef: number: 3; type: "Journal Article"
FEATURES Location/Qualifiers
source 1..11912
/mol_type="other DNA"
/organism="synthetic DNA construct"
rep_origin complement(1..712)
/direction=LEFT
/label=oriV
/note="incP origin of replication"
primer_bind 1222..1238
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
misc_feature 1239..1295
/label=MCS
/note="pUC18/19 multiple cloning site"
primer_bind complement(1308..1324)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind complement(1332..1348)
/label=lac operator
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(1356..1386)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind complement(1401..1422)
/label=CAP binding site
/note="CAP binding activates transcription in the presence
of cAMP."
CDS complement(1657..2025)
/codon_start=1
/label=traJ
/note="oriT-recognizing protein"
/translation="MADETKPTRKGSPPIKVYCLPDERRAIEEKAAAAGMSLSAYLLAV
GQGYKITGVVDYEHVRELARINGDLGRLGGLLKLWLTDDPRTARFGDATILALLAKIEE
KQDELGKVMMGVVRPRAEP"
oriT complement(2058..2167)
/direction=LEFT
/label=oriT
/note="incP origin of transfer"
CDS complement(2851..3498)
/codon_start=1
/label=TetR
/note="tetracycline resistance regulatory protein"
/translation="MTKLQPNTVIRAALDLLNEVGVDGLTTRKLAERLGVQQPALYWHF
RNKRALLDALAEAMLAENHTHSVPRADDDWRSFLIGNARSFRQALLAYRDGARIHAGTR
PGAPQMETADAQLRFLCEAGFSAGDAVNALMTISYFTVGAVLEEQAGDSDAGERGGTVE
QAPLSPLLRAAIDAFDEAGPDAAFEQGLAVIVDGLAKRRLVVRNVEGPRKGDD"
CDS 3604..4800
/codon_start=1
/label=TcR
/note="tetracycline efflux protein"
/translation="MKPNIPLIVILSTVALDAVGIGLIMPVLPGLLRDLVHSNDVTAHY
GILLALYALVQFACAPVLGALSDRFGRRPILLVSLAGATVDYAIMATAPFLWVLYIGRI
VAGITGATGAVAGAYIADITDGDERARHFGFMSACFGFGMVAGPVLGGLMGGFSPHAPF
FAAAALNGLNFLTGCFLLPESHKGERRPLRREALNPLASFRWARGMTVVAALMAVFFIM
QLVGQVPAALWVIFGEDRFHWDATTIGISLAAFGILHSLAQAMITGPVAARLGERRALM
LGMIADGTGYILLAFATRGWMAFPIMVLLASGGIGMPALQAMLSRQVDEERQGQLQGSL
AALTSLTSIVGPLLFTAIYAASITTWNGWAWIAGAALYLLCLPALRRGLWSGAGQRADR
"
promoter 4840..4917
/label=lacIq promoter
/note="In the lacIq allele, a single base change in the
promoter boosts expression of the lacI gene about 10-fold."
CDS 4918..5997
/codon_start=1
/label=lacI
/note="lac repressor"
/translation="VKPVTLYDVAEYAGVSYQTVSRVVNQASHVSAKTREKVEAAMAEL
NYIPNRVAQQLAGKQSLLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVERSGV
EACKAAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQTPINSIIFSH
EDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREGDWSA
MSGFQQTMQMLNEGIVPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDTEDSSC
YIPPLTTIKQDFRLLGQTSVDRLLQLSQGQAVKGNQLLPVSLVKRKTTLAPNTQTASPR
ALADSLMQLARQVSRLESGQ"
CDS complement(6656..7321)
/codon_start=1
/gene="upf16.5"
/product="unknown plasmid factor 16.5"
/label=upf16.5
/protein_id="ABO32169.1"
/translation="MTWCIANARALWGQFRLGVQQPALYWHFRNKRALLDALASLSIAR
AHGALYELPINRGLKLTIVIKAQIRRLGAADVQDFREIRLSALKKAPEMFGSVYEHEEK
KPMEAFAERLRDAVAFGAYIDGEIIGLSVFKQEDGPKDAHKAHLSGVFVEPEQRGRGVA
GMLLRALPAGLLLVMIVRQIPTGIWWMRIFILGALNISLFWSLLFISVYRLPGGSRRR"
gene complement(6656..7321)
/gene="upf16.5"
/label=upf16.5
CDS complement(7299..8444)
/codon_start=1
/label=trfA
/note="trans-acting replication protein that binds to and
activates oriV"
/translation="MNRTFDRKAYRQELIDAGFSAEDAETIASRTVMRAPRETFQSVGS
MVQQATAKIERDSVQLAPPALPAPSAAVERSRRLEQEAAGLAKSMTIDTRGTMTTKKRK
TAGEDLAKQVSEAKQAALLKHTKQQIKEMQLSLFDIAPWPDTMRAMPNDTARSALFTTR
NKKIPREALQNKVIFHVNKDVKITYTGVELRADDDELVWQQVLEYAKRTPIGEPITFTF
YELCQDLGWSINGRYYTKAEECLSRLQATAMGFTSDRVGHLESVSLLHRFRVLDRGKKT
SRCQVLIDEEIVVLFAGDHYTKFIWEKYRKLSPTARRMFDYFSSHREPYPLKLETFRLM
CGSDSTRVKKWREQVGEACEELRGSGLVEHAWVNDDLVHCKR"
CDS complement(8493..8843)
/codon_start=1
/gene="ssb"
/product="single-strand binding protein"
/label=ssb
/protein_id="ABO32172.1"
/translation="MSHNQFQFIGNLTRDTEVRHGNSNKPQAIFDIAVNEEWRNDAGDK
QERTDFFRIKCFGSQAEAHGKYLGKGSLVFVQGKIRNTKYEKDGQTVYGTDFIADKVDY
LDTKAPGGSNQE"
gene complement(8493..8843)
/gene="ssb"
/label=ssb
CDS 8964..9329
/codon_start=1
/gene="trbA"
/product="TrbA"
/label=trbA
/note="regulation of tra gene expression"
/protein_id="ABO32173.1"
/translation="MYNQIFFTNILRLLDERGMTKHELSERAGVSISFLSDLTNGKANP
SLKVMEAIADALETPLPLLLESTDLDREALAEIAGHPFKSSVPPGYERISVVLPSHKAF
IVKKWGDDTRKKLRGRL"
gene 8964..9329
/gene="trbA"
/label=trbA
CDS complement(10367..11461)
/codon_start=1
/gene="incC1"
/product="IncC1"
/label=incC1
/note="IncC partitioning protein, long form"
/protein_id="ABO32174.1"
/translation="MGVIHEETAYRKPVPGGDPGAGSGAADHRDSAGRLSRWEATGDVR
NVAGTDQGRSVASGASRVGRVRGQELARGVRAGNGGSAGTSGVHRPEVGSGRQEKTGNQ
TMKTLVTANQKGGVGKTSTLVHLAFDFFERGLRVAVIDLDPQGNASYTLKDFATGLHAS
KLFGAVPAGGWTETAPAAGDGQAARLALIESNPVLANAERLSLDDARELFGANIKALAN
QGFDVCLIDTAPTLGVGLAAALFAADYVLSPIELEAYSIQGIKKMVTTIANVRQKNAKL
QFLGMVPSKVDARNPRHARHQAELLAAYPKMMIPATVGLRSSIADALASGVPVWKIKKT
AARKASKEVRALADYVFTKMEISQ"
gene complement(10367..11461)
/gene="incC1"
/label=incC1
CDS complement(10367..11146)
/codon_start=1
/gene="incC2"
/product="IncC2"
/label=incC2
/note="IncC partitioning protein, short form"
/protein_id="ABO32175.1"
/translation="MKTLVTANQKGGVGKTSTLVHLAFDFFERGLRVAVIDLDPQGNAS
YTLKDFATGLHASKLFGAVPAGGWTETAPAAGDGQAARLALIESNPVLANAERLSLDDA
RELFGANIKALANQGFDVCLIDTAPTLGVGLAAALFAADYVLSPIELEAYSIQGIKKMV
TTIANVRQKNAKLQFLGMVPSKVDARNPRHARHQAELLAAYPKMMIPATVGLRSSIADA
LASGVPVWKIKKTAARKASKEVRALADYVFTKMEISQ"
gene complement(10367..11146)
/gene="incC2"
/label=incC2
CDS complement(11143..11448)
/codon_start=1
/gene="korA"
/product="KorA"
/label=korA
/note="regulation of IncC repression"
/protein_id="ABO32176.1"
/translation="MKKRLTESQFQEAIQGLEVGQQTIEIARGVLVDGKPQATFATSLG
LTRGAVSQAVHRVWAAFEDKNLPEGYARVTAVLPEHQAYIVRKWEADAKKKQETKR"
gene complement(11143..11448)
/gene="korA"
/label=korA