pYBA-1201 载体 (V001959#)

载体基本信息
载体名称 pYBA-1201 载体长度 5661 bp
载体类型 Binary vector 载体来源 Yao L, Yan X, Wang H, Cao M, Robaglia C.

pYBA-1201 载体载体图谱

pYBA-12015661 bp60012001800240030003600420048005400pUC ori; derived from pUC19derived from pBBR1MCS-2RB 'overdrive' sequenceT-DNA right borderCaMV poly-A signal; derived from pRT103MCS; polylinker; derived from pBluescriptNOS terminatorhptIINOS promoterT-DNA left borderderived from pBBR1MCS-2

pYBA-1201 载体载体序列

LOCUS       Exported                5661 bp ds-DNA     circular SYN 18-DEC-2018
DEFINITION  Binary vector pYBA-1201, complete sequence.
ACCESSION   KU221172
VERSION     .
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
REFERENCE   1  (bases 1 to 5661)
  AUTHORS   Yao L, Yan X, Wang H, Cao M, Robaglia C.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2015) Beijing Agro-Biotechnology Research Center, 
            Beijing Academy of Agriculture and Forestry Sciences, 9 Shuguang 
            Huayuan Zhonglu, Beijing 100097, P.R. China
REFERENCE   2  (bases 1 to 5661)
  AUTHORS   .
  TITLE     Direct Submission
FEATURES             Location/Qualifiers
     source          1..5661
                     /organism="Binary vector pYBA-1201"
                     /mol_type="other DNA"
                     /db_xref="taxon:1853768"
     rep_origin      1..589
                     /note="pUC ori; derived from pUC19"
     misc_feature    594..2367
                     /label=derived from pBBR1MCS-2
                     /note="derived from pBBR1MCS-2"
     rep_origin      741..1510
                     /label=pBBR1 oriV
                     /note="replication origin of the broad-host-range plasmid 
                     pBBR1 from Bordetella bronchiseptica; requires the pBBR1 
                     Rep protein for replication"
     CDS             1511..2173
                     /codon_start=1
                     /gene="rep"
                     /product="Rep"
                     /label=rep
                     /note="involved in plasmid replication"
                     /protein_id="ANH21037.1"
                     /translation="MATQSREIGIQAKNKPGHWVQTERKAHEAWAGLIARKPTAAMLLH
                     HLVAQMGHQNAVVVSQKTLSKLIGRSLRTVQYAVKDLVAERWISVVKLNGPGTVSAYVV
                     NDRVAWGQPRDQLRLSVFSAAVVVDHDDQDESLLGHGDLRRIPTLYPGEQQLPTGPGEE
                     PPSQPGIPGMEPDLPALTETEEWERRGQQRLPMPDEPCFLDDGEPLEPPTRVTLPRR"
     gene            1511..2173
                     /gene="rep"
                     /label=rep
     misc_feature    2368..2391
                     /label=RB 'overdrive' sequence
                     /note="RB 'overdrive' sequence"
     misc_feature    2392..2416
                     /label=T-DNA right border
                     /note="T-DNA right border"
     regulatory      2428..2628
                     /regulatory_class="polyA_signal_sequence"
                     /note="CaMV poly-A signal; derived from pRT103"
     misc_feature    2629..2781
                     /note="MCS; polylinker; derived from pBluescript"
     misc_feature    2635..2742
                     /label=MCS
                     /note="pBluescript multiple cloning site"
     primer_bind     2652..2668
                     /label=KS primer
                     /note="common sequencing primer, one of multiple similar 
                     variants"
     primer_bind     complement(2702..2718)
                     /label=SK primer
                     /note="common sequencing primer, one of multiple similar 
                     variants"
     regulatory      2782..3037
                     /regulatory_class="terminator"
                     /note="NOS terminator"
     terminator      2785..3037
                     /label=NOS terminator
                     /note="nopaline synthase terminator and poly(A) signal"
     CDS             complement(3038..4063)
                     /codon_start=1
                     /gene="hptII"
                     /product="hygromycin phosphotransferase"
                     /label=hptII
                     /note="involved in hygromycin resistance"
                     /protein_id="ANH21038.1"
                     /translation="MKKPELTATSVEKFLIEKFDSVSDLMQLSEGEESRAFSFDVGGRG
                     YVLRVNSCADGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVTLQDLP
                     ETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQ
                     TVMDDTVSASVAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMF
                     GDSQYEVANIFFWRPWLACMEQQTRYFERRHPELAGSPRLRAYMLRIGLDQLYQSLVDG
                     NFDDAAWAQGRCDAIVRSGAGTVGRTQIARRSAAVWTDGCVEVLADSGNRRPSTRPRAK
                     K"
     gene            complement(3038..4063)
                     /gene="hptII"
                     /label=hptII
     regulatory      4064..4370
                     /regulatory_class="promoter"
                     /note="NOS promoter"
     promoter        complement(4072..4255)
                     /function="NOS promoter"
                     /label=NOS promoter
                     /note="nopaline synthase promoter"
     promoter        complement(4108..4287)
                     /label=NOS promoter
                     /note="nopaline synthase promoter"
     misc_feature    4390..4414
                     /label=T-DNA left border
                     /note="T-DNA left border"
     misc_feature    4417..5661
                     /label=derived from pBBR1MCS-2
                     /note="derived from pBBR1MCS-2"
     CDS             complement(4601..5395)
                     /codon_start=1
                     /gene="nptII"
                     /product="NptII"
                     /label=nptII
                     /note="kanamycin resistance determinant"
                     /protein_id="ANH21039.1"
                     /translation="MIEQDGLHAGSPAAWVERLFGYDWAQQTIGCSDAAVFRLSAQGRP
                     VLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLS
                     SHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQ
                     GLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVADRYQDIA
                     LATRDIAEELGGEWADRFLVLYGIAAPDSQRIAFYRLLDEFF"
     gene            complement(4601..5395)
                     /gene="nptII"
                     /label=nptII

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